Publications of Winfried Denk

Kim, J. S.; Greene, M. J.; Zlateski, A.; Lee, K.; Richardson, M.; Turaga, S. C.; Purcaro, M.; Balkam, M.; Robinson, A.; Behabadi, B. F. et al.; Campos, M.; Denk, W.; Seung, H. S.; EyeWirers: Space-time wiring specificity supports direction selectivity in the retina. Nature 509 (7500), pp. 331 - 336 (2014)

Helmstaedter, M.; Briggman, K.; Turaga, S. C.; Jain, V.; Seung, H. S.; Denk, W.: Connectomic reconstruction of the inner plexiform layer in the mouse retina. Nature 500 (7461), pp. 168 - 174 (2013)

Titze, B.; Denk, W.: Automated in-chamber specimen coating for serial block-face electron microscopy. Journal of Microscopy 250 (2), pp. 101 - 110 (2013)

Binding, J.; Mikula, S.; Denk, W.: Low-dosage maximum-a-posteriori focusing and stigmation. Microscopy and Microanalysis 19 (1), pp. 38 - 55 (2013)

Helmchen, F.; Denk, W.; Kerr, J.: Miniaturization of two-photon microscopy for imaging in freely moving animals. Cold Spring Harbor Protocols 2013 (10), pp. 904 - 913 (2013)

Mikula, S.; Binding, J.; Denk, W.: Staining and embedding the whole mouse brain for electron microscopy. Nature methods 9 (12), pp. 1198 - 1201 (2012)

Bargmann, C.; Denk, W.; Graybiel, A.: An Interview With...: The Kavli prize winners. Nature Reviews Neuroscience 13 (10), pp. 669 - 673 (2012)

Andres, B.; Koethe, U.; Kroeger, T.; Helmstaedter, M.; Briggman, K. L.; Denk, W.; Hamprecht, F. A.: 3D segmentation of SBFSEM images of neuropil by a graphical model over supervoxel boundaries. Medical Image Analysis 16 (4), pp. 796 - 805 (2012)

Denk, W.; Briggman, K.; Helmstaedter, M.: Structural neurobiology: missing link to a mechanistic understanding of neural computation. Nature Reviews Neuroscience 13 (5), pp. 351 - 358 (2012)

Denk, W.; Miesenböck, G.: Neurotechnology: Summa technologiae. Current Opinion in Neurobiology 22 (1), pp. 1 - 2 (2012)

Kleinfeld, D.; Bharioke, A.; Blinder, P.; Bock, D. D.; Briggman, K. L.; Chklovskii, D. B.; Denk, W.; Helmstaedter, M.; Kaufhold, J. P.; Lee, W.-C. A. et al.; Meyer, H. S.; Micheva, K. D.; Oberlaender, M.; Prohaska, S.; Reid, R. C.; Smith, S. J.; Takemura, S.; Tsai, P. S.; Sakmann, B.: Large-scale automated histology in the pursuit of connectomes. The Journal of Neuroscience: the Official Journal of the Society for Neuroscience 31 (45), pp. 16125 - 16138 (2011)

Lichtman, J. W.; Denk, W.: The big and the small: challenges of imaging the brain's circuits. Science 334 (6056), pp. 618 - 623 (2011)

Helmstaedter, M.; Briggman, K.; Denk, W.: High-accuracy neurite reconstruction for high-throughput neuroanatomy. Nature Neuroscience 14 (8), pp. 1081 - 1088 (2011)

Mittmann, W.; Wallace, D. J.; Czubayko, U.; Herb, J. T.; Schaefer, A. T.; Looger, L. L.; Denk, W.; Kerr, J. N. D.: Two-photon calcium imaging of evoked activity from L5 somatosensory neurons in vivo. Nature Neuroscience 14 (8), pp. 1089 - 1093 (2011)

Briggman, K.; Helmstaedter, M.; Denk, W.: Wiring specificity in the direction-selectivity circuit of the retina. Nature 471 (7337), pp. 183 - 188 (2011)

Theer, P.; Denk, W.; Sheves, M.; Lewis, A.; Detwiler, P. B.: Second-harmonic generation imaging of membrane potential with retinal analogues. Biophysical Journal 100 (1), pp. 232 - 242 (2011)

Aguirre, A. D.; Sawinski, J.; Huang, S. W.; Zhou, C.; Denk, W.; Fujimoto, J. G.: High speed optical coherence microscopy with autofocus adjustment and a miniaturized endoscopic imaging probe. Optics Express 18 (5), pp. 4222 - 4239 (2010)

Turaga, S. C.; Murray, J. F.; Jain, V.; Roth, F.; Helmstaedter, M.; Briggman, K.; Denk, W.; Seung, H. S.: Convolutional networks can learn to generate affinity graphs for image segmentation. Neural computation 22 (2), pp. 511 - 538 (2010)

Yamahachi, H.; Marik, S. A.; McManus, J. N.; Denk, W.; Gilbert, C. D.: Rapid axonal sprouting and pruning accompany functional reorganization in primary visual cortex. Neuron 64 (5), pp. 719 - 729 (2009)

Sawinski, J.; Haydon-Wallace, D. J.; Greenberg, D. S.; Grossmann, S.; Denk, W.; Kerr, J.: Visually evoked activity in cortical cells imaged in freely moving animals. Proceedings of the National Academy of Sciences of the United States of America 106 (46), pp. 19557 - 19562 (2009)